Commit graph

20 commits

Author SHA1 Message Date
f997b5fdd7 plots: Add rankings plot 2021-12-02 15:28:03 +01:00
f2bc4318a2 Fix some package issues 2021-11-23 09:42:21 +01:00
255123c74f Regenerate documentation 2021-11-22 14:10:22 +01:00
5a58f457a4 analyze: Add optimization 2021-11-19 15:07:15 +01:00
de1c1ed40e preset: Remove min_n_species customization 2021-11-18 14:03:11 +01:00
33056bfa40 Move species count to analysis 2021-11-18 14:03:11 +01:00
e28bcaafed plots: Add position plot 2021-11-15 15:12:13 +01:00
19bae34a96 plots: Add max_rank to score plot 2021-11-15 09:21:37 +01:00
4dda7fa49e ranking: Filter out species with too few species 2021-11-12 10:25:07 +01:00
910eb06fe9 analyze: Include preset in result 2021-11-12 10:16:11 +01:00
6d9511fa2e Fix some package issues 2021-11-06 13:22:57 +01:00
28f9834984 plots: Move rank plot and add boxplot 2021-11-06 13:03:36 +01:00
d075380559 ranking: Add plot method 2021-11-05 23:05:40 +01:00
f98800f1e0 Add comparison feature 2021-11-05 19:08:50 +01:00
4992bb2930 ranking: Use S3 classes and rename optimize method 2021-11-05 14:47:33 +01:00
55958e0d85 preset: Turn into S3 class 2021-11-03 14:17:39 +01:00
c0a1d965d7 Add more optimization targets 2021-10-21 11:42:44 +02:00
064f75ddae data: Remove n_species from genes 2021-10-21 11:42:16 +02:00
37f468658c Add framework for progress information 2021-10-19 15:03:10 +02:00
c52d42c2b6 Initial commit 2021-10-19 13:39:55 +02:00