mirror of
https://github.com/johrpan/ubigen.git
synced 2025-10-26 19:57:24 +01:00
Use package's ranking function for included data
This commit is contained in:
parent
698ea5086a
commit
a6f0a64c2c
3 changed files with 18 additions and 16 deletions
|
|
@ -5,6 +5,7 @@
|
|||
\title{Rank genes based on how ubiquitous they are.}
|
||||
\usage{
|
||||
rank_genes(
|
||||
data = ubigen::genes,
|
||||
cross_sample_metric = "above_95",
|
||||
cross_sample_weight = 0.5,
|
||||
level_metric = "median_expression_normalized",
|
||||
|
|
@ -13,6 +14,10 @@ rank_genes(
|
|||
variation_weight = -0.25
|
||||
)
|
||||
}
|
||||
\arguments{
|
||||
\item{data}{The input data to use. This should either be the result of a
|
||||
previous call to this function or the return value of \code{\link[=analyze]{analyze()}}.}
|
||||
}
|
||||
\value{
|
||||
A \code{data.table} with gene data as well as the scores, ranks and
|
||||
percentiles for each gene.
|
||||
|
|
|
|||
Loading…
Add table
Add a link
Reference in a new issue