d47eb29ec1
Allow showing all genes in correlation plot
2022-08-17 16:17:58 +02:00
684bffe94f
Add rankings correlation plot
2022-08-14 18:04:40 +02:00
30237d9e06
Add positions plot to results page
2022-08-04 11:54:52 +02:00
7428b8b93b
Use correct background and show increase for GSEA
2022-07-22 09:35:24 +02:00
c7ea8fd1c5
Remove max rank from scores plot
2022-07-22 09:26:43 +02:00
9a20abd69b
Temporarily remove DisGeNET integration
...
Supplying the custom background results in internal server errors on the
DisGeNET backend. We don't want to present results without a proper
background set.
2022-07-01 12:40:54 +02:00
6db14c4d4a
Supply custom background for enrichment
2022-07-01 12:38:46 +02:00
e7cbb4ea33
Move comparison editor to results page
2022-06-22 13:48:37 +02:00
9960379645
Show confidence intervals for comparison
2022-06-03 17:56:14 +02:00
13b5efc1e3
Reindent code to use just two spaces
2022-05-26 12:44:09 +02:00
47b8d7a1f0
Show all chromosomes in position plot by default
2022-05-23 11:39:30 +02:00
17b738378a
Show distances in results and add filtering
2022-05-23 11:24:49 +02:00
507f90e084
Add comparison text
2022-05-22 15:17:02 +02:00
cf642242ce
Hide messages from disgenet2r
2022-05-22 14:11:02 +02:00
717b3eb789
Don't use DT's bootstrap theme
2022-05-22 14:08:58 +02:00
74d7865389
Add options to configure default gene sets
2022-05-19 16:24:23 +02:00
22f5e86625
Show gene sets in positions plot
2022-05-18 17:33:11 +02:00
6a5e5ed9c6
Add chromosomal positions plot
2022-05-17 21:58:40 +02:00
40164ebf84
server: Cache analysis transiently
2022-02-24 17:24:40 +01:00
2ced93aa94
Switch to the results page when the preset changes
2022-01-25 16:27:18 +01:00
2faaeb869a
methods: Allow to optimize for comparison genes
2022-01-25 13:05:23 +01:00
11c125465d
Refactor input page and handle preset errors
2022-01-25 13:05:23 +01:00
04b615bb7c
server: Generate rankings plot from preset
2022-01-13 13:37:02 +01:00
7834360e2a
results: Move to separate module
2021-12-30 12:33:50 +01:00
b6e9179f13
server: Show percentiles in results table
2021-12-30 12:33:50 +01:00
2bf96ffd38
Adapt to changes in geposan
2021-12-16 13:52:14 +01:00
2041cf2c2c
Add DisGeNET integration
2021-12-08 14:49:50 +01:00
36546570e0
Update gprofiler integration
2021-12-08 14:38:38 +01:00
ffa90cd667
Further simplify results section
2021-12-08 14:11:39 +01:00
b6e1bc6603
Add rankings plot
2021-12-06 14:24:31 +01:00
1871c3b870
Add comparison genes
2021-12-06 13:54:22 +01:00
48c903f8c7
Update plots
2021-12-02 17:22:27 +01:00
9a285fd91b
Add chromosome plot
2021-11-22 13:54:04 +01:00
2926bb4da0
results: Remove scroller extension
2021-11-17 23:08:20 +01:00
a1807691d5
Move species count to preset
2021-11-17 22:58:55 +01:00
c009bfa371
scatter plot: Move to geposan
2021-11-15 15:12:42 +01:00
bc99e358c1
assessment: Show comparison genes
2021-11-15 14:22:33 +01:00
9b9109b389
preset editor: Simplify and add more options
2021-11-15 10:22:28 +01:00
b5957262a3
Use plots from geposan
2021-11-15 09:35:47 +01:00
f485eadaf5
Adapt to geposan changes and add new methods
2021-11-14 22:34:46 +01:00
9709360d45
Improve species slider performance
2021-11-02 15:07:04 +01:00
766ffa15cb
filters: Improve user interface
2021-11-02 14:28:04 +01:00
b57297dfdf
Allow filtering by rank
2021-11-02 13:41:03 +01:00
4cf5bff125
Move caching to geposan
2021-10-21 17:26:28 +02:00
ca1d0e442a
Add preset editor
2021-10-21 14:56:19 +02:00
365cf13dcb
Add more optimization targets
2021-10-21 11:43:34 +02:00
d4611f47cf
Convert to R package
2021-10-20 15:34:52 +02:00
