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README.md
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README.md
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# Ubigen
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# Ubigen
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This R package contains precomputed data including comparisons in gene
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Ubigen is an interactive web application for analyzing ubiquitously expressed
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expression within the [GTEx database](https://gtexportal.org). It provides a
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genes. It is publicly available at
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graphical interface to analyze and visualize those data to rank genes based on
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[ubigen.uni-rostock.de](https://ubigen.uni-rostock.de).
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how ubiquitously expressed they are.
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This repository contains an R package including the input data, the methods and
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the code for the interactive web interface.
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## Installation
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## Installation
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You can install the development version of `ubigen` using:
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You can install the development version of `ubigen` using:
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```r
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```r
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# install.packages("remotes")
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# install.packages("pak")
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remotes::install_git("https://github.com/johrpan/ubigen.git")
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pak::pkg_install("johrpan/ubigen")
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```
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```
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## Usage
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## Usage
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ubigen::run_app()
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ubigen::run_app()
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```
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```
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For additional information, take a look at the built-in documentation
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For additional information on using the R package, take a look at the built-in
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(`?ubigen::run_app`).
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documentation (`?ubigen::run_app`).
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## License
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## License
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