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# Ubigen
This R package contains precomputed data including comparisons in gene
expression within the [GTEx database](https://gtexportal.org). It provides a
graphical interface to analyze and visualize those data to rank genes based on
how ubiquitously expressed they are.
Ubigen is an interactive web application for analyzing ubiquitously expressed
genes. It is publicly available at
[ubigen.uni-rostock.de](https://ubigen.uni-rostock.de).
This repository contains an R package including the input data, the methods and
the code for the interactive web interface.
## Installation
You can install the development version of `ubigen` using:
```r
# install.packages("remotes")
remotes::install_git("https://gitlab.uni-rostock.de/ep135/ubigen.git")
# install.packages("pak")
pak::pkg_install("git::https://gitlab.uni-rostock.de/ep135/ubigen.git")
```
## Usage
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ubigen::run_app()
```
For additional information, take a look at the built-in documentation
(`?ubigen::run_app`).
For additional information on using the R package, take a look at the built-in
documentation (`?ubigen::run_app`).
## License