johrpan/ubigen
1
0
Fork 0
mirror of https://github.com/johrpan/ubigen.git synced 2025-10-27 04:07:25 +01:00
Code Issues Projects Releases Packages Wiki Activity Actions

Add Dockerfile

Browse source
This commit is contained in:
Elias Projahn 2025-03-05 17:22:57 +01:00
parent 401e327fdc
commit 414dba5693
6 changed files with 38 additions and 5 deletions
Download patch file Download diff file Expand all files Collapse all files

15
README.md
View file

@ -6,7 +6,9 @@ genes. It is publicly available at
This repository contains an R package including the input data, the methods and
the code for the interactive web interface.
## Installation
## Installation and Usage
### Local
You can install the development version of `ubigen` using:
@ -15,11 +17,9 @@ You can install the development version of `ubigen` using:
pak::pkg_install("git::https://gitlab.uni-rostock.de/ep135/ubigen.git")
```
## Usage
You only need one function to get started. It will run the application and
serve the graphical user interface which can be viewed using your preferred
web browser.
web browser:
```r
ubigen::run_app()
@ -28,6 +28,13 @@ ubigen::run_app()
For additional information on using the R package, take a look at the built-in
documentation (`?ubigen::run_app`).
### Server
Docker images for deploying Ubigen on a server are available on Docker Hub at
[johrpan/ubigen](https://hub.docker.com/r/johrpan/ubigen). They expose the web
application at port 3464. We recommend setting up a reverse proxy to enable
TLS.
## License
This program is free software: you can redistribute it and/or modify it under