2022-06-02 19:30:31 +02:00
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# Ubigen
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This R package contains precomputed data including comparisons in gene
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expression within the [GTEx database](https://gtexportal.org). It provides a
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graphical interface to analyze and visualize those data to rank genes based on
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how ubiquitously expressed they are.
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## Installation
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You can install the development version of `ubigen` using:
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```r
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# install.packages("remotes")
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2025-03-04 19:56:52 +01:00
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remotes::install_git("https://github.com/johrpan/ubigen.git")
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2022-06-02 19:30:31 +02:00
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```
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## Usage
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You only need one function to get started. It will run the application and
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serve the graphical user interface which can be viewed using your preferred
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web browser.
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```r
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ubigen::run_app()
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```
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For additional information, take a look at the built-in documentation
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(`?ubigen::run_app`).
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## License
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This program is free software: you can redistribute it and/or modify it under
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the terms of the GNU Affero General Public License as published by the Free
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Software Foundation, either version 3 of the License, or (at your option) any
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later version.
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This program is distributed in the hope that it will be useful, but WITHOUT ANY
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WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A
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PARTICULAR PURPOSE. See the
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2022-06-22 11:11:03 +00:00
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[GNU Affero General Public License](https://www.gnu.org/licenses/agpl-3.0.html)
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2022-06-02 19:30:31 +02:00
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for more details.
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