|
|
4b1ab9fc9a
|
correlation: Fix data preparation
|
2021-11-14 17:49:16 +01:00 |
|
|
|
7bd63aa6d3
|
proximity: Remove use_positions
|
2021-11-14 17:21:39 +01:00 |
|
|
|
cfc5e7a6bf
|
Implement all methods using positions additionally
|
2021-11-14 16:35:59 +01:00 |
|
|
|
9cbc127177
|
Fix some analysis bugs
|
2021-11-12 18:22:22 +01:00 |
|
|
|
0e641e4dd2
|
ranking: Fix error copying the input
|
2021-11-12 10:33:33 +01:00 |
|
|
|
4dda7fa49e
|
ranking: Filter out species with too few species
|
2021-11-12 10:25:07 +01:00 |
|
|
|
910eb06fe9
|
analyze: Include preset in result
|
2021-11-12 10:16:11 +01:00 |
|
|
|
6d9511fa2e
|
Fix some package issues
|
2021-11-06 13:22:57 +01:00 |
|
|
|
28f9834984
|
plots: Move rank plot and add boxplot
|
2021-11-06 13:03:36 +01:00 |
|
|
|
d075380559
|
ranking: Add plot method
|
2021-11-05 23:05:40 +01:00 |
|
|
|
f98800f1e0
|
Add comparison feature
|
2021-11-05 19:08:50 +01:00 |
|
|
|
4992bb2930
|
ranking: Use S3 classes and rename optimize method
|
2021-11-05 14:47:33 +01:00 |
|
|
|
4792bbaefd
|
analyze: Turn analysis into S3 class
|
2021-11-05 14:33:39 +01:00 |
|
|
|
55958e0d85
|
preset: Turn into S3 class
|
2021-11-03 14:17:39 +01:00 |
|
|
|
6494ae8200
|
data: Include more chromosomes
|
2021-11-02 11:00:37 +01:00 |
|
|
|
df6e23d219
|
Handle caching
|
2021-10-21 17:25:44 +02:00 |
|
|
|
b8365e0efb
|
Sort preset values to get predictable hashes
|
2021-10-21 16:30:26 +02:00 |
|
|
|
7f2847423c
|
ranking: Clamp weights to 0.0
|
2021-10-21 16:21:55 +02:00 |
|
|
|
21a5817988
|
Properly access distance data
|
2021-10-21 14:26:03 +02:00 |
|
|
|
c0a1d965d7
|
Add more optimization targets
|
2021-10-21 11:42:44 +02:00 |
|
|
|
064f75ddae
|
data: Remove n_species from genes
|
2021-10-21 11:42:16 +02:00 |
|
|
|
0eac84377d
|
Reimplement correlation with matrix based approach
|
2021-10-20 11:09:37 +02:00 |
|
|
|
e6bca4d515
|
Fix bugs in correlation method
|
2021-10-19 17:34:36 +02:00 |
|
|
|
37f468658c
|
Add framework for progress information
|
2021-10-19 15:03:10 +02:00 |
|
|
|
c52d42c2b6
|
Initial commit
|
2021-10-19 13:39:55 +02:00 |
|
