mirror of
https://github.com/johrpan/geposan.git
synced 2025-10-26 18:57:25 +01:00
26 lines
744 B
R
26 lines
744 B
R
% Generated by roxygen2: do not edit by hand
|
|
% Please edit documentation in R/plots.R
|
|
\name{plot_scores}
|
|
\alias{plot_scores}
|
|
\title{Plot a ranking as a scatter plot of scores.}
|
|
\usage{
|
|
plot_scores(ranking, gene_sets = NULL, labels = NULL, max_rank = NULL)
|
|
}
|
|
\arguments{
|
|
\item{ranking}{The ranking to visualize.}
|
|
|
|
\item{gene_sets}{A list of gene sets (containing vectors of gene IDs) that
|
|
will be highlighted in the plot.}
|
|
|
|
\item{labels}{Labels for the gene sets. This is required if gene sets are
|
|
given and has to have the same length.}
|
|
|
|
\item{max_rank}{The maximum rank of the highlighted genes. All genes that
|
|
are ranked lower will appear greyed out.}
|
|
}
|
|
\description{
|
|
This function requires the package \code{plotly}.
|
|
}
|
|
\seealso{
|
|
ranking()
|
|
}
|