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39 lines
1.3 KiB
R
39 lines
1.3 KiB
R
#' Information on included species from the Ensembl database.
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#'
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#' @format A [data.table] with the following columns:
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#' \describe{
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#' \item{id}{Unique species ID}
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#' \item{name}{Human readable species name}
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#' \item{n_chromosomes}{Number of chromosomes}
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#' \item{median_chromosome_length}{Median length of chromosomes}
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#' }
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"species"
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#' Information on human genes within the Ensembl database.
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#'
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#' This includes only genes on the primary suggested assembly of the human
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#' nuclear DNA.
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#'
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#' @format A [data.table] with the following columns:
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#' \describe{
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#' \item{id}{Ensembl gene ID}
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#' \item{name}{The gene's HGNC name}
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#' \item{chrosome}{The human chromosome the gene is located on}
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#' }
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"genes"
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#' Information on gene positions across species.
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#'
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#' This dataset contains each known value for a gene's distance to the telomeres
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#' per species. The data is sourced from Ensembl.
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#'
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#' @format A [data.table] with the following columns:
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#' \describe{
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#' \item{species}{Species ID}
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#' \item{gene}{Gene ID}
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#' \item{chromosome_name}{Chromosome name from the specified species}
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#' \item{start_position}{Start position in base pairs}
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#' \item{end_position}{End position in base pairs}
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#' \item{distance}{Computed distance to nearest telomere}
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#' }
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"distances"
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