mirror of
https://github.com/johrpan/geposan.git
synced 2025-10-26 18:57:25 +01:00
25 lines
851 B
R
25 lines
851 B
R
% Generated by roxygen2: do not edit by hand
|
|
% Please edit documentation in R/ranking.R
|
|
\name{optimize_weights}
|
|
\alias{optimize_weights}
|
|
\title{Find the best weights to rank the results.}
|
|
\usage{
|
|
optimize_weights(results, methods, reference_gene_ids, target = "mean")
|
|
}
|
|
\arguments{
|
|
\item{results}{Results from \code{\link[=analyze]{analyze()}} or \code{\link[=ranking]{ranking()}}.}
|
|
|
|
\item{methods}{Methods to include in the score.}
|
|
|
|
\item{reference_gene_ids}{IDs of the reference genes.}
|
|
|
|
\item{target}{The optimization target. It may be one of "mean", "min" or
|
|
"max" and results in the respective rank being optimized.}
|
|
}
|
|
\value{
|
|
Named list pairing method names with their optimal weights.
|
|
}
|
|
\description{
|
|
This function finds the optimal parameters to \code{\link[=ranking]{ranking()}} that result in the
|
|
reference genes ranking particulary high.
|
|
}
|