From e4d1d6203a2df6c50c9510ff9125464cf1ef08a7 Mon Sep 17 00:00:00 2001
From: Elias Projahn <elias@johrpan.de>
Date: Fri, 26 Apr 2024 19:02:08 +0200
Subject: [PATCH 1/3] Correct optional dependencies

---
 DESCRIPTION | 4 +---
 1 file changed, 1 insertion(+), 3 deletions(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index dcba0fc..f95f8b3 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -28,9 +28,7 @@ Imports:
     rlang,
     progress
 Suggests:
-    biomaRt,
-    httr,
     plotly,
     rlog,
-    stringr,
+    RMariaDB,
     usethis

From d584cfe12dd3adc5576bd1a53ed4ebe1bf302ee7 Mon Sep 17 00:00:00 2001
From: Elias Projahn <elias@johrpan.de>
Date: Sun, 23 Feb 2025 16:03:47 +0100
Subject: [PATCH 2/3] plots: Use grey background in scores_by_position

---
 R/plots.R | 5 +++--
 1 file changed, 3 insertions(+), 2 deletions(-)

diff --git a/R/plots.R b/R/plots.R
index 706a4ed..7971c10 100644
--- a/R/plots.R
+++ b/R/plots.R
@@ -718,8 +718,9 @@ plot_scores_by_position <- function(ranking,
         "Percentile: {round(percentile * 100, digits = 2)}%"
       ),
       marker = list(
-        color = base_color(),
-        size = 5
+        size = 3,
+        color = "#919191",
+        opacity = 0.5
       ),
       hoverinfo = "text"
     ) |>

From fdf89e849698d83a98207f6f24ebaba1f6f8a486 Mon Sep 17 00:00:00 2001
From: Elias Projahn <elias@johrpan.de>
Date: Sun, 23 Feb 2025 16:04:44 +0100
Subject: [PATCH 3/3] Version 1.1.0

---
 DESCRIPTION | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index f95f8b3..038dbfe 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: geposan
 Title: Gene Position Analysis
-Version: 1.0.1
+Version: 1.1.0
 Authors@R:
     person(
         "Elias",