From fddd0c3fa08c8302ceb290b00c3697ab48f7b552 Mon Sep 17 00:00:00 2001
From: Elias Projahn <elias@johrpan.de>
Date: Mon, 20 Jun 2022 14:30:51 +0200
Subject: [PATCH] Fix preset bug when filtering species

---
 R/preset.R | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/R/preset.R b/R/preset.R
index 39e0d46..88828db 100644
--- a/R/preset.R
+++ b/R/preset.R
@@ -41,7 +41,7 @@ preset <- function(reference_gene_ids,
   ]
 
   # Count included genes per species.
-  species_n_genes <- geposan::distances[, .(n_genes = .N), by = "species"]
+  species_n_genes <- distances[, .(n_genes = .N), by = "species"]
 
   # Filter out species that have too few of the genes.
   species_ids_filtered <- species_n_genes[