diff --git a/R/adjacency.R b/R/method_adjacency.R
similarity index 100%
rename from R/adjacency.R
rename to R/method_adjacency.R
diff --git a/R/clustering.R b/R/method_clustering.R
similarity index 100%
rename from R/clustering.R
rename to R/method_clustering.R
diff --git a/R/correlation.R b/R/method_correlation.R
similarity index 100%
rename from R/correlation.R
rename to R/method_correlation.R
diff --git a/R/neural.R b/R/method_neural.R
similarity index 100%
rename from R/neural.R
rename to R/method_neural.R
diff --git a/R/species_adjacency.R b/R/method_species_adjacency.R
similarity index 100%
rename from R/species_adjacency.R
rename to R/method_species_adjacency.R
diff --git a/man/adjacency.Rd b/man/adjacency.Rd
index 4eac7b9..3643298 100644
--- a/man/adjacency.Rd
+++ b/man/adjacency.Rd
@@ -1,5 +1,5 @@
 % Generated by roxygen2: do not edit by hand
-% Please edit documentation in R/adjacency.R
+% Please edit documentation in R/method_adjacency.R
 \name{adjacency}
 \alias{adjacency}
 \title{Score genes based on their proximity to the reference genes.}
diff --git a/man/clusteriness.Rd b/man/clusteriness.Rd
index 3e9a49c..6d100e1 100644
--- a/man/clusteriness.Rd
+++ b/man/clusteriness.Rd
@@ -1,5 +1,5 @@
 % Generated by roxygen2: do not edit by hand
-% Please edit documentation in R/clustering.R
+% Please edit documentation in R/method_clustering.R
 \name{clusteriness}
 \alias{clusteriness}
 \title{Perform a cluster analysis.}
diff --git a/man/clustering.Rd b/man/clustering.Rd
index a0c04a6..55ab855 100644
--- a/man/clustering.Rd
+++ b/man/clustering.Rd
@@ -1,5 +1,5 @@
 % Generated by roxygen2: do not edit by hand
-% Please edit documentation in R/clustering.R
+% Please edit documentation in R/method_clustering.R
 \name{clustering}
 \alias{clustering}
 \title{Process genes clustering their distance to telomeres.}
diff --git a/man/correlation.Rd b/man/correlation.Rd
index dda7070..4261806 100644
--- a/man/correlation.Rd
+++ b/man/correlation.Rd
@@ -1,5 +1,5 @@
 % Generated by roxygen2: do not edit by hand
-% Please edit documentation in R/correlation.R
+% Please edit documentation in R/method_correlation.R
 \name{correlation}
 \alias{correlation}
 \title{Score genes based on their correlation with the reference genes.}
diff --git a/man/densest.Rd b/man/densest.Rd
index 252c6f1..181a270 100644
--- a/man/densest.Rd
+++ b/man/densest.Rd
@@ -1,5 +1,5 @@
 % Generated by roxygen2: do not edit by hand
-% Please edit documentation in R/adjacency.R
+% Please edit documentation in R/method_adjacency.R
 \name{densest}
 \alias{densest}
 \title{Find the densest value in the data.}
diff --git a/man/neural.Rd b/man/neural.Rd
index 8b7e040..46419f1 100644
--- a/man/neural.Rd
+++ b/man/neural.Rd
@@ -1,5 +1,5 @@
 % Generated by roxygen2: do not edit by hand
-% Please edit documentation in R/neural.R
+% Please edit documentation in R/method_neural.R
 \name{neural}
 \alias{neural}
 \title{Find genes by training and applying a neural network.}
diff --git a/man/species_adjacency.Rd b/man/species_adjacency.Rd
index 0607559..b2bf81f 100644
--- a/man/species_adjacency.Rd
+++ b/man/species_adjacency.Rd
@@ -1,5 +1,5 @@
 % Generated by roxygen2: do not edit by hand
-% Please edit documentation in R/species_adjacency.R
+% Please edit documentation in R/method_species_adjacency.R
 \name{species_adjacency}
 \alias{species_adjacency}
 \title{Score genes based on their adjacency to the reference genes within species.}