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plots: Refactor and improve

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Elias Projahn 2021-12-02 17:23:18 +01:00
parent f997b5fdd7
commit a347bf0ad4
5 changed files with 125 additions and 138 deletions
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9
man/plot_positions.Rd
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@ -4,18 +4,13 @@
\alias{plot_positions}
\title{Plot gene positions.}
\usage{
plot_positions(species_ids, gene_sets, labels, use_positions = FALSE)
plot_positions(species_ids, gene_sets)
}
\arguments{
\item{species_ids}{IDs of species to show in the plot.}
\item{gene_sets}{A list of gene sets (containing vectors of gene IDs) that
will be highlighted in the plot.}
\item{labels}{Labels for the gene sets. This is required if gene sets are
given and has to have the same length.}
\item{use_positions}{Whether to display positions instead of distances.}
will be highlighted in the plot. The names will be used as labels.}
}
\description{
This function requires the package \code{plotly}.