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Add option to show all chromosomes in positions plot
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3 changed files with 36 additions and 20 deletions
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@ -4,12 +4,14 @@
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\alias{plot_scores_by_position}
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\title{Plot scores in relation to chromosomal position of genes.}
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\usage{
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plot_scores_by_position(ranking, chromosome_name, gene_sets = NULL)
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plot_scores_by_position(ranking, chromosome_name = NULL, gene_sets = NULL)
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}
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\arguments{
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\item{ranking}{The ranking to visualize.}
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\item{chromosome_name}{The chromosome to visualize.}
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\item{chromosome_name}{The chromosome to visualize. If this is \code{NULL} all,
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chromosomes will be included and the x-axis will show distances instead of
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positions.}
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\item{gene_sets}{Named list of vectors of genes to highlight. The list names
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will be used as labels.}
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