From 57fc1199930dc34e762891ea0289c15e6b97a4b0 Mon Sep 17 00:00:00 2001
From: Elias Projahn <elias@johrpan.de>
Date: Thu, 24 Feb 2022 14:37:33 +0100
Subject: [PATCH] preset: Fix documentation cross-reference

---
 R/preset.R    | 2 +-
 man/preset.Rd | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/R/preset.R b/R/preset.R
index c3fd23e..ad15018 100644
--- a/R/preset.R
+++ b/R/preset.R
@@ -7,7 +7,7 @@
 #' orthologs for less than 25% of the input species will be excluded from the
 #' preset and the analyis. See the different method functions for the available
 #' methods: [clustering()], [correlation()], [neural()], [adjacency()] and
-#' [proximity()].
+#' [species_adjacency()].
 #'
 #' @param reference_gene_ids IDs of reference genes to compare to.
 #' @param methods List of methods to apply.
diff --git a/man/preset.Rd b/man/preset.Rd
index bf614f6..3f3d44d 100644
--- a/man/preset.Rd
+++ b/man/preset.Rd
@@ -31,5 +31,5 @@ filtered based on how many species have data for them. Genes which only have
 orthologs for less than 25\% of the input species will be excluded from the
 preset and the analyis. See the different method functions for the available
 methods: \code{\link[=clustering]{clustering()}}, \code{\link[=correlation]{correlation()}}, \code{\link[=neural]{neural()}}, \code{\link[=adjacency]{adjacency()}} and
-\code{\link[=proximity]{proximity()}}.
+\code{\link[=species_adjacency]{species_adjacency()}}.
 }