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adjacency: Use minimum difference in distances

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This commit is contained in:
Elias Projahn 2022-01-09 20:26:42 +01:00
parent 2ceda0691b
commit 32776469bf
2 changed files with 23 additions and 9 deletions
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6
man/adjacency.Rd
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@ -4,11 +4,15 @@
\alias{adjacency}
\title{Score genes based on their proximity to the reference genes.}
\usage{
adjacency(estimate = densest)
adjacency(estimate = densest, combination = min)
}
\arguments{
\item{estimate}{A function that will be used to summarize the distance
values for each gene. See \code{\link[=densest]{densest()}} for the default implementation.}
\item{combination}{A function that will be used to combine the different
distances to the reference genes. By default \code{\link[=min]{min()}} is used. That means
the distance to the nearest reference gene will be scored.}
}
\value{
An object of class \code{geposan_method}.