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preset: Actually filter input genes

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Elias Projahn 2021-11-26 11:41:49 +01:00
parent c6a5c2b59c
commit 2c15ba55c1
1 changed files with 2 additions and 1 deletions
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R/preset.R
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@ -54,6 +54,7 @@ preset <- function(methods = c(
# Filter out genes with less than 25% existing orthologs. # Filter out genes with less than 25% existing orthologs.
gene_ids_filtered <- genes_n_species[ gene_ids_filtered <- genes_n_species[
gene %chin% gene_ids &
n_species >= 0.25 * length(species_ids), n_species >= 0.25 * length(species_ids),
gene gene
] ]