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Properly access distance data

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This commit is contained in:
Elias Projahn 2021-10-21 14:26:03 +02:00
parent c0a1d965d7
commit 21a5817988
5 changed files with 12 additions and 18 deletions
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4
R/clusteriness.R
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@ -36,11 +36,11 @@ clusteriness_priv <- function(data, height = 1000000) {
}
# Process genes clustering their distance to telomeres.
clusteriness <- function(distances, preset, progress = NULL) {
clusteriness <- function(preset, progress = NULL) {
results <- data.table(gene = preset$gene_ids)
# Prefilter the input data by species.
distances <- distances[species %chin% preset$species_ids]
distances <- geposan::distances[species %chin% preset$species_ids]
# Add an index for quickly accessing data per gene.
setkey(distances, gene)