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Use median by default in adjacency methods
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4 changed files with 6 additions and 8 deletions
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@ -4,7 +4,7 @@
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\alias{species_adjacency}
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\title{Score genes based on their adjacency to the reference genes within species.}
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\usage{
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species_adjacency(distance_estimate = min, summarize = stats::median)
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species_adjacency(distance_estimate = stats::median, summarize = stats::median)
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}
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\arguments{
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\item{distance_estimate}{Function for combining the distance differences
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