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										 |  |  | % Generated by roxygen2: do not edit by hand | 
					
						
							|  |  |  | % Please edit documentation in R/plots.R | 
					
						
							|  |  |  | \name{plot_scores_by_position} | 
					
						
							|  |  |  | \alias{plot_scores_by_position} | 
					
						
							|  |  |  | \title{Plot scores in relation to chromosomal position of genes.} | 
					
						
							|  |  |  | \usage{ | 
					
						
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										 |  |  | plot_scores_by_position(ranking, chromosome_name = NULL, gene_sets = NULL) | 
					
						
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										 |  |  | } | 
					
						
							|  |  |  | \arguments{ | 
					
						
							|  |  |  | \item{ranking}{The ranking to visualize.} | 
					
						
							|  |  |  | 
 | 
					
						
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										 |  |  | \item{chromosome_name}{The chromosome to visualize. If this is \code{NULL} all, | 
					
						
							|  |  |  | chromosomes will be included and the x-axis will show distances instead of | 
					
						
							|  |  |  | positions.} | 
					
						
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										 |  |  | 
 | 
					
						
							|  |  |  | \item{gene_sets}{Named list of vectors of genes to highlight. The list names | 
					
						
							|  |  |  | will be used as labels.} | 
					
						
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										 |  |  | } | 
					
						
							|  |  |  | \value{ | 
					
						
							|  |  |  | A \code{plotly} figure. | 
					
						
							|  |  |  | } | 
					
						
							|  |  |  | \description{ | 
					
						
							|  |  |  | Plot scores in relation to chromosomal position of genes. | 
					
						
							|  |  |  | } | 
					
						
							|  |  |  | \seealso{ | 
					
						
							|  |  |  | ranking() | 
					
						
							|  |  |  | } |